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Sarah Wait Zaranek [Wed, 1 Apr 2020 03:40:07 +0000 (03:40 +0000)]
updating dockerfiles
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Wed, 1 Apr 2020 03:39:45 +0000 (03:39 +0000)]
updating yml
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Wed, 1 Apr 2020 03:39:07 +0000 (03:39 +0000)]
Updating annotation and gatk code
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Wed, 1 Apr 2020 03:38:30 +0000 (03:38 +0000)]
updating preprocessing code
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Wed, 1 Apr 2020 03:37:36 +0000 (03:37 +0000)]
Adding ploidy code
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Wed, 11 Mar 2020 15:04:35 +0000 (15:04 +0000)]
Updating yml
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Wed, 11 Mar 2020 15:04:04 +0000 (15:04 +0000)]
Updating CWL for overarching workflow
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Fri, 6 Mar 2020 08:43:54 +0000 (08:43 +0000)]
cleaning up src directory and updating head.html
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Fri, 6 Mar 2020 08:42:59 +0000 (08:42 +0000)]
Adding cwl to convert gvcf to vcf
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Thu, 5 Mar 2020 18:13:22 +0000 (18:13 +0000)]
Updating cwl
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Thu, 5 Mar 2020 13:44:51 +0000 (13:44 +0000)]
Adding cwl to annotate and generate report
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Thu, 27 Feb 2020 19:07:01 +0000 (19:07 +0000)]
Updating files
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Thu, 27 Feb 2020 19:04:23 +0000 (19:04 +0000)]
Merge branch 'master' of git.arvados.org:arvados-tutorial
Sarah Wait Zaranek [Thu, 27 Feb 2020 18:56:16 +0000 (18:56 +0000)]
Rearranging Folders
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Thu, 27 Feb 2020 18:54:54 +0000 (18:54 +0000)]
Removing old annotation code
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Thu, 27 Feb 2020 18:52:56 +0000 (18:52 +0000)]
Updating report python code and removing vep step from workflow
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Wed, 26 Feb 2020 19:14:08 +0000 (19:14 +0000)]
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
Sarah Wait Zaranek [Tue, 25 Feb 2020 02:00:02 +0000 (02:00 +0000)]
Adding in progress code for annotation
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <sarah@curii.com>
no issue #
projects / arvados-tutorial.git / log