Merge branch 'blog-examples'
[arvados-tutorial.git] / WGS-processing /
2021-12-07 Ward VandewegeMerge branch 'blog-examples' main
2021-10-26 Peter AmstutzLower RAM request by bwa to run on 9tee4
2021-10-26 Peter AmstutzBugfix .bai secondary file for ApplyBSQR behavior
2021-01-14 Jiayong LiMerge branch '17049-make-singlechrom'
2021-01-14 Jiayong LiAdd comments on the chr19 only yml 17049-make-singlechrom
2020-12-28 Jiayong LiAdd chr19 yml by changing fullintervallist
2020-08-13 Sarah Wait Zaranekupdating yml
2020-07-27 Sarah Wait ZaranekUpdating yml for 2 vcfs of known sites
2020-07-27 Sarah Wait ZaranekFixing labels for knownsites
2020-07-27 Sarah Wait ZaranekUpdating to allow for two vcfs of known sites
2020-07-23 Sarah Wait ZaranekUpdating cwl and yml for intervals and other changes
2020-07-14 Sarah Wait ZaranekUpdating HTML edam comments
2020-07-12 Sarah Wait ZaranekUpdating comments
2020-07-12 Sarah Wait ZaranekFixing edam reference
2020-07-10 Sarah Wait ZaranekMoving #
2020-07-07 Sarah Wait ZaranekUpdating docker reference
2020-07-07 Sarah Wait ZaranekUpdating bwa-samtools dockerfile
2020-07-07 Sarah Wait ZaranekAdding more formats to yml
2020-07-07 Sarah Wait ZaranekUpdating yml for formats
2020-07-03 Sarah Wait ZaranekRemoving initial work dir requirement when not needed
2020-07-03 Sarah Wait ZaranekUpdating yml files
2020-07-03 Sarah Wait ZaranekUpdating yml files
2020-07-02 Sarah Wait ZaranekRemoving white spaces and commenting out schemas
2020-07-02 Sarah Wait ZaranekRemoving white space and commenting out schemas
2020-07-02 Sarah Wait ZaranekMoving fastqc into not in use for docker containers
2020-07-02 Sarah Wait ZaranekRemoving white spaces and commenting schemas
2020-07-02 Sarah Wait ZaranekUpdating for new Docker containter
2020-07-01 Sarah Wait ZaranekAdding links about CWL to the readme
2020-07-01 Sarah Wait ZaranekSwitching variable knownsites1 to knownsites in yml...
2020-07-01 Sarah Wait ZaranekSwitching variable knownsites1 to knownsites
2020-07-01 Sarah Wait ZaranekUpdating report generation code
2020-07-01 Sarah Wait ZaranekUpdating yml to include intervals
2020-07-01 Sarah Wait ZaranekAdding metatdata and labels
2020-07-01 Sarah Wait ZaranekAdding metadata, updating variables
2020-07-01 Sarah Wait ZaranekAdding metadata
2020-07-01 Sarah Wait ZaranekAdding metadata and step renaming
2020-07-01 Sarah Wait Zaranekupdating metadata
2020-06-29 Sarah Wait Zaranekupdating for metadata and yml to check command line cwl
2020-06-26 Sarah Wait ZaranekAdding labels and metadata
2020-06-26 Sarah Wait ZaranekAdding arv to namespace
2020-06-26 Sarah Wait ZaranekAdding labels and other metadata
2020-06-25 Sarah Wait Zaranekremoving swp file
2020-06-25 Sarah Wait ZaranekAdding labels and metadata
2020-06-25 Sarah Wait ZaranekUpdating labels and metadata
2020-06-25 Sarah Wait ZaranekEven more formatting
2020-06-25 Sarah Wait ZaranekFixing formating issue
2020-06-25 Sarah Wait ZaranekAdding Arvados info to readme
2020-06-25 Sarah Wait Zaranekreorg of yml files
2020-06-25 Sarah Wait ZaranekUpdataing readme and yml files
2020-06-25 Sarah Wait ZaranekUpdating labels
2020-06-25 Sarah Wait ZaranekAdding more labels
2020-06-24 Sarah Wait ZaranekAdding more labels/metadata
2020-06-24 Sarah Wait ZaranekAdding labels and other annotations
2020-06-24 Sarah Wait ZaranekUpdating labels and hints on cwl
2020-06-24 Sarah Wait ZaranekAdding labels
2020-06-24 Sarah Wait ZaranekAdding labels and formats to cwl
2020-06-23 Sarah Wait ZaranekUpdating main cwl workflow
2020-06-23 Sarah Wait ZaranekAdding license info to cwl
2020-06-23 Sarah Wait ZaranekAdding changes to Dockerfiles
2020-06-23 Sarah Wait ZaranekUpdating docker file for fastqc
2020-06-23 Sarah Wait ZaranekUpdating clinvar report docker file and reorganizing...
2020-06-19 Sarah Wait ZaranekUpdating readme
2020-06-19 Sarah Wait ZaranekMoving license location
2020-06-19 Sarah Wait ZaranekAdding license and licenseignore
2020-06-19 Sarah Wait ZaranekUpdating readme
2020-06-19 Sarah Wait ZaranekMoving readme to markdown
2020-06-18 Sarah Wait ZaranekUpdating not-in-use directory
2020-06-18 Sarah Wait ZaranekUpdating dockerfiles
2020-06-18 Sarah Wait Zaranekremoving un-needed yml
2020-06-18 Sarah Wait Zaranekcleaning up src files
2020-06-18 Sarah Wait ZaranekUpdating readme and reorganization
2020-06-18 Sarah Wait ZaranekUpdating links to "helper" cwl
2020-06-18 Sarah Wait ZaranekAdd scatter wf for overall scatter
2020-06-18 Sarah Wait ZaranekAdding readme and clean up
2020-06-18 Sarah Wait ZaranekRearranging for clarity