From: Sarah Wait Zaranek Date: Thu, 18 Jun 2020 01:04:03 +0000 (+0000) Subject: Updating dockerfiles X-Git-Url: https://git.arvados.org/arvados-tutorial.git/commitdiff_plain/048038d42c6eb19005e7b121eddddeb2e7ca225c Updating dockerfiles Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek no issue # --- diff --git a/WGS-processing/docker/bwa/Dockerfile b/WGS-processing/docker/bwa/Dockerfile index 27a6254..94254dd 100644 --- a/WGS-processing/docker/bwa/Dockerfile +++ b/WGS-processing/docker/bwa/Dockerfile @@ -1,7 +1,6 @@ -FROM arvados/jobs -MAINTAINER Bryan Cosca - +FROM arvados/jobs:latest USER root +MAINTAINER Sarah Wait Zaranek RUN apt-get update -qy RUN apt-get install -qy build-essential wget cmake zlib1g-dev python-pip unzip libbz2-dev liblzma-dev libcurl4-openssl-dev libncurses-dev @@ -21,5 +20,3 @@ ADD picard.jar / WORKDIR / -# ADD bcftools-1.10.2.tar.bz2 / - diff --git a/WGS-processing/docker/clinvar-report/Dockerfile b/WGS-processing/docker/clinvar-report/Dockerfile index d8811e0..48d35df 100644 --- a/WGS-processing/docker/clinvar-report/Dockerfile +++ b/WGS-processing/docker/clinvar-report/Dockerfile @@ -1,5 +1,6 @@ FROM arvados/jobs:latest USER root +MAINTAINER Sarah Wait Zaranek # Install python tools RUN apt-get update && apt-get install -y --no-install-recommends apt-utils diff --git a/WGS-processing/docker/fastqc/Dockerfile b/WGS-processing/docker/fastqc/Dockerfile index 9d784ca..6d9badb 100644 --- a/WGS-processing/docker/fastqc/Dockerfile +++ b/WGS-processing/docker/fastqc/Dockerfile @@ -1,7 +1,6 @@ -FROM arvados/jobs -MAINTAINER Bryan Cosca - +FROM arvados/jobs:latest USER root +MAINTAINER Sarah Wait Zaranek RUN apt-get update -qy RUN apt-get install -qy build-essential wget cmake zlib1g-dev python-pip unzip libbz2-dev liblzma-dev libcurl4-openssl-dev libncurses-dev