X-Git-Url: https://git.arvados.org/arvados-tutorial.git/blobdiff_plain/f80667171aa3d9efb35d60faa4d9cdabb50ca330..ec300c76b5a3f927c3cd5035669b70847ade3854:/WGS-processing/cwl/helper/getfastq.cwl

diff --git a/WGS-processing/cwl/helper/getfastq.cwl b/WGS-processing/cwl/helper/getfastq.cwl
index 035b4c3..59c6771 100644
--- a/WGS-processing/cwl/helper/getfastq.cwl
+++ b/WGS-processing/cwl/helper/getfastq.cwl
@@ -41,6 +41,7 @@ expression: |
     var fastq2 = [];
     for (var i = 0; i < inputs.fastqdir.listing.length; i++) {
       var name = inputs.fastqdir.listing[i];
+      name.format = 'http://edamontology.org/format_1930'
       if (name.basename.indexOf('_1.fastq.gz') != -1 ) {
         fastq1.push(name);
       }