X-Git-Url: https://git.arvados.org/arvados-tutorial.git/blobdiff_plain/e3b01c795c65bbfa0c09f9e7b8ffb80a950746d7..8d016e850b2ae0ed8170d44de36ec476f2a5c836:/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml diff --git a/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml b/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml index 4909ce2..f6d4943 100644 --- a/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml +++ b/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml @@ -1,11 +1,15 @@ bam: class: File location: keep:377c02de508dff9e4474f9a48d754933+53821/marked_dupsERR1726424.sorted.bam + reference: class: File location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa + sample: ERR1726424 + scattercount: '32' + knownsites1: class: File location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz