X-Git-Url: https://git.arvados.org/arvados-tutorial.git/blobdiff_plain/72f04012089ad1a81148056e7943a0bc531b742d..6093cec998ae55174ea6ca1e868be01c302c7294:/RNA-Seq/cwl/helper/samtools_index.cwl

diff --git a/RNA-Seq/cwl/helper/samtools_index.cwl b/RNA-Seq/cwl/helper/samtools_index.cwl
index 3ae2e9b..5d0a2de 100755
--- a/RNA-Seq/cwl/helper/samtools_index.cwl
+++ b/RNA-Seq/cwl/helper/samtools_index.cwl
@@ -32,11 +32,6 @@ outputs:
   bam_sorted_indexed:
     type: File
     secondaryFiles: .bai
-    format: edam:format_2572  # BAM 
     outputBinding:
       glob: $(inputs.bam_sorted.basename)
       
-$namespaces:
-  edam: https://edamontology.org/
-$schemas:
-  - https://edamontology.org/EDAM_1.18.owl