X-Git-Url: https://git.arvados.org/arvados-tutorial.git/blobdiff_plain/6093cec998ae55174ea6ca1e868be01c302c7294..7bdffd71945b5426581f197a8afc2e2fedbf1bd4:/RNA-Seq/yml/RNA-seq-wf.yml

diff --git a/RNA-Seq/yml/RNA-seq-wf.yml b/RNA-Seq/yml/RNA-seq-wf.yml
index 19f8c54..828c70c 100644
--- a/RNA-Seq/yml/RNA-seq-wf.yml
+++ b/RNA-Seq/yml/RNA-seq-wf.yml
@@ -1,13 +1,9 @@
-fq:
-  - class: File
-    location: keep:pirca-4zz18-blweknwtwyjys0i/Mov10_oe_1.subset.fq
-    format: http://edamontology.org/format_1930
-  - class: File
-    location: keep:pirca-4zz18-blweknwtwyjys0i/Mov10_oe_2.subset.fq
-    format: http://edamontology.org/format_1930
+fqdir:
+  class: Directory
+  location: keep:pirca-4zz18-blweknwtwyjys0i/
 genome:
   class: Directory
-  location: keep:pirca-4zz18-c543b5welq68g90/hg19-chr1-STAR-index
+  location: keep:pirca-4zz18-c543b5welq68g90/hg19-STAR-index
 gtf:
   class: File
   location: keep:pirca-4zz18-c543b5welq68g90/chr1-hg19_genes.gtf