X-Git-Url: https://git.arvados.org/arvados-tutorial.git/blobdiff_plain/48f2b200216c57788577d45e080ab6bae212f90b..5080fcfd4a95af83c57b7a386b7ae9e0d38ef7c5:/WGS-processing/cwl/helper/annotate-vcf.cwl

diff --git a/WGS-processing/cwl/helper/annotate-vcf.cwl b/WGS-processing/cwl/helper/annotate-vcf.cwl
index bb4989e..1e028c4 100644
--- a/WGS-processing/cwl/helper/annotate-vcf.cwl
+++ b/WGS-processing/cwl/helper/annotate-vcf.cwl
@@ -3,9 +3,9 @@ class: CommandLineTool
 label: Annotate and filter VCF
 
 requirements:
-  - class: DockerRequirement
+  DockerRequirement:
     dockerPull: curii/clinvar-report
-  - class: ShellCommandRequirement
+  ShellCommandRequirement: {}
 
 hints:
   ResourceRequirement:
@@ -32,7 +32,6 @@ inputs:
 
 outputs:
   reporttxt: stdout
-  label: Annotated text from VCF
 
 arguments:
   - bcftools