X-Git-Url: https://git.arvados.org/arvados-tutorial.git/blobdiff_plain/37c7841cd802e86ef51046b56331c1fd39b9a853..7521f8770b81d944aad3c1e0fd7ef5a886600190:/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml diff --git a/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml b/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml index 20b5a3b..bf0b989 100644 --- a/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml +++ b/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml @@ -16,7 +16,12 @@ sample: ERR1726424 scattercount: '32' -knownsites: +knownsites1: + class: File + format: edam:format_3016 + location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.dbsnp138.vcf + +knownsites2: class: File format: edam:format_3016 location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz