X-Git-Url: https://git.arvados.org/arvados-tutorial.git/blobdiff_plain/37c7841cd802e86ef51046b56331c1fd39b9a853..7521f8770b81d944aad3c1e0fd7ef5a886600190:/WGS-processing/yml/helper/gatk-baserecalibrator-with-interval.yml

diff --git a/WGS-processing/yml/helper/gatk-baserecalibrator-with-interval.yml b/WGS-processing/yml/helper/gatk-baserecalibrator-with-interval.yml
index d22173f..e813417 100644
--- a/WGS-processing/yml/helper/gatk-baserecalibrator-with-interval.yml
+++ b/WGS-processing/yml/helper/gatk-baserecalibrator-with-interval.yml
@@ -8,8 +8,14 @@ reference:
 
 sample: ERR1726424
 
-knownsites:
+knownsites1:
   class: File
+  format: edam:format_3016
+  location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.dbsnp138.vcf
+
+knownsites2:
+  class: File
+  format: edam:format_3016
   location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz
 
 intervallist: