X-Git-Url: https://git.arvados.org/arvados-tutorial.git/blobdiff_plain/22f7e3b6540d16b1c7cfff1735e1553f7241c540..f80667171aa3d9efb35d60faa4d9cdabb50ca330:/WGS-processing/cwl/helper/report-wf.cwl diff --git a/WGS-processing/cwl/helper/report-wf.cwl b/WGS-processing/cwl/helper/report-wf.cwl index b53f385..9e675ff 100644 --- a/WGS-processing/cwl/helper/report-wf.cwl +++ b/WGS-processing/cwl/helper/report-wf.cwl @@ -3,7 +3,7 @@ class: Workflow label: Report generation workflow inputs: - gvcf: + gvcf: type: File format: edam:format_3016 # GVCF label: Gathered GVCF @@ -19,9 +19,9 @@ inputs: label: Function used to create HTML report headhtml: type: File - format: edam:format_2331# HTML + format: edam:format_2331 # HTML label: Header for HTML report - tailhtml: + tailhtml: type: File format: edam:format_2331 # HTML label: Footer for HTML report @@ -29,7 +29,7 @@ inputs: outputs: report: type: File - format: edam:format_1964 # HTML + format: edam:format_2331 # HTML label: ClinVar variant report outputSource: generate-report/report @@ -63,6 +63,6 @@ $namespaces: s: https://schema.org/ edam: http://edamontology.org/ -$schemas: - - https://schema.org/version/latest/schema.rdf - - http://edamontology.org/EDAM_1.18.owl +#$schemas: +# - https://schema.org/version/latest/schema.rdf +# - http://edamontology.org/EDAM_1.18.owl