Updating yml

[arvados-tutorial.git] / yml / bwa-gatk-wf-chr19.yml

diff --git a/yml/bwa-gatk-wf-chr19.yml b/yml/bwa-gatk-wf-chr19.yml
index 0844fec4add23ad87270cec1dfb9bea8c86b607f..c46b835c1a45350297a928e43fffa3fbe8f0de3a 100644 (file)
--- a/yml/bwa-gatk-wf-chr19.yml
+++ b/yml/bwa-gatk-wf-chr19.yml
@@ -1,11 +1,14 @@
 sample: hu297A5D_AE2CH6SK4DG
 sample: hu297A5D_AE2CH6SK4DG

+

 reference:
   class: File
   location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
 reference:
   class: File
   location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa

+

 fastq1:
   class: File
 fastq1:
   class: File

-  location: ../../bam/hu297A5D_AE2CH6SK4DG-EXT_R1.fastq.gz
+  location: keep:fafa02df612fe883b6d7bdc0bc755afb+612/hu297A5D_AE2CH6SK4DG-EXT_R1.fastq.gz
+

 fastq2:
   class: File
 fastq2:
   class: File

-  location: ../../bam/hu297A5D_AE2CH6SK4DG-EXT_R2.fastq.gz
+  location: keep:fafa02df612fe883b6d7bdc0bc755afb+612/hu297A5D_AE2CH6SK4DG-EXT_R2.fastq.gz