Add splitDir to take Directory input

[arvados-tutorial.git] / RNA-Seq / yml / RNA-seq-wf.yml

diff --git a/RNA-Seq/yml/RNA-seq-wf.yml b/RNA-Seq/yml/RNA-seq-wf.yml
index 19f8c541e494d60f12f7c0d7fe31a9ed6fdc08a6..3c3b3aef3d279983770f403e58bca459d5355f2a 100644 (file)
--- a/RNA-Seq/yml/RNA-seq-wf.yml
+++ b/RNA-Seq/yml/RNA-seq-wf.yml
@@ -1,14 +1,12 @@
-fq:
-  - class: File
-    location: keep:pirca-4zz18-blweknwtwyjys0i/Mov10_oe_1.subset.fq
-    format: http://edamontology.org/format_1930
-  - class: File
-    location: keep:pirca-4zz18-blweknwtwyjys0i/Mov10_oe_2.subset.fq
-    format: http://edamontology.org/format_1930
+fqdir:
+  class: Directory
+  location: keep:1360b500543d1d0b041084a2f99d33b6+567/
+  #location: keep:pirca-4zz18-blweknwtwyjys0i/
 genome:
   class: Directory
-  location: keep:pirca-4zz18-c543b5welq68g90/hg19-chr1-STAR-index
+  location: keep:64e703acc21226ce99f3d88eacdacd0b+3159/hg19-STAR-index
+  #location: keep:pirca-4zz18-c543b5welq68g90/hg19-STAR-index
 gtf:
   class: File
-  location: keep:pirca-4zz18-c543b5welq68g90/chr1-hg19_genes.gtf
-
+  location: keep:64e703acc21226ce99f3d88eacdacd0b+3159/chr1-hg19_genes.gtf
+  #location: keep:pirca-4zz18-c543b5welq68g90/chr1-hg19_genes.gtf