Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>

[arvados-tutorial.git] / cwl / testyml / bwamem-samtools-view.yml

diff --git a/cwl/testyml/bwamem-samtools-view.yml b/cwl/testyml/bwamem-samtools-view.yml
new file mode 100644 (file)
index 0000000..24f4eb4
--- /dev/null
+++ b/cwl/testyml/bwamem-samtools-view.yml
@@ -0,0 +1,10 @@
+reference:
+  class: File
+  location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
+fastq1:
+  class: File
+  location: ../../bam/hu297A5D_AE2CH6SK4DG-EXT_100000_R1.fastq.gz
+fastq2:
+  class: File
+  location: ../../bam/hu297A5D_AE2CH6SK4DG-EXT_100000_R2.fastq.gz
+