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Add splitDir to take Directory input
[arvados-tutorial.git]
/
WGS-processing
/
cwl
/
helper
/
samtools-sort.cwl
diff --git
a/WGS-processing/cwl/helper/samtools-sort.cwl
b/WGS-processing/cwl/helper/samtools-sort.cwl
index fa9c0e95c9c28b242c9a9ce01394209031f0a263..7f51678de8b99240ccebe4fe4f1f8cefd9611e6e 100644
(file)
--- a/
WGS-processing/cwl/helper/samtools-sort.cwl
+++ b/
WGS-processing/cwl/helper/samtools-sort.cwl
@@
-4,7
+4,7
@@
label: Sort BAM
requirements:
DockerRequirement:
requirements:
DockerRequirement:
- dockerPull: curii/bwa-samtools
-picard
+ dockerPull: curii/bwa-samtools
ShellCommandRequirement: {}
ResourceRequirement:
ramMin: 20000
ShellCommandRequirement: {}
ResourceRequirement:
ramMin: 20000