Switching variable knownsites1 to knownsites in yml files

[arvados-tutorial.git] / WGS-processing / yml / helper / gatk-wf-with-interval.yml

diff --git a/WGS-processing/yml/helper/gatk-wf-with-interval.yml b/WGS-processing/yml/helper/gatk-wf-with-interval.yml
index 5761d1d01fa8044fb18708f7d5dd8dffc021d64d..e1e2b942056cbd52b23e3bdca77937ddbcec3436 100644 (file)
--- a/WGS-processing/yml/helper/gatk-wf-with-interval.yml
+++ b/WGS-processing/yml/helper/gatk-wf-with-interval.yml
@@ -1,13 +1,17 @@
 bam:
   class: File
   location: keep:377c02de508dff9e4474f9a48d754933+53821/marked_dupsERR1726424.sorted.bam 
+
 reference:
   class: File
   location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
+
 intervallist:
   class: File
   location: keep:4d4947f6637f0acec32580e09d991967+815/0000-scattered.interval_list
+
 sample: ERR1726424
-knownsites1:
+
+knownsites:
   class: File
   location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz