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Removing white spaces and commenting schemas
[arvados-tutorial.git]
/
WGS-processing
/
cwl
/
helper
/
fastqc.cwl
diff --git
a/WGS-processing/cwl/helper/fastqc.cwl
b/WGS-processing/cwl/helper/fastqc.cwl
index fffcdadffe75c35f8b053becbc73a6e7d6a2d695..30193a12a3a27225ee56ff28dc071e5184fc57d6 100644
(file)
--- a/
WGS-processing/cwl/helper/fastqc.cwl
+++ b/
WGS-processing/cwl/helper/fastqc.cwl
@@
-14,11
+14,11
@@
hints:
version: [ "0.11.9" ]
inputs:
version: [ "0.11.9" ]
inputs:
- fastq1:
+ fastq1:
type: File
format: edam:format_1930 # FASTQ
label: One of set of pair-end FASTQs (R1)
type: File
format: edam:format_1930 # FASTQ
label: One of set of pair-end FASTQs (R1)
- fastq2:
+ fastq2:
type: File
format: edam:format_1930 # FASTQ
label: One of set of pair-end FASTQs (R2)
type: File
format: edam:format_1930 # FASTQ
label: One of set of pair-end FASTQs (R2)
@@
-36,7
+36,7
@@
outputs:
outputBinding:
glob: "*fastqc.zip"
outputBinding:
glob: "*fastqc.zip"
-baseCommand: fastqc
+baseCommand: fastqc
arguments:
- $(inputs.fastq1.path)
arguments:
- $(inputs.fastq1.path)