label: WGS processing workflow for single sample
requirements:
- - class: SubworkflowFeatureRequirement
+ SubworkflowFeatureRequirement: {}
inputs:
fastq1:
run: report-wf.cwl
in:
gvcf: haplotypecaller/gatheredgvcf
- samplename: sample
+ sample: sample
clinvarvcf: clinvarvcf
reportfunc: reportfunc
headhtml: headhtml
s: https://schema.org/
edam: http://edamontology.org/
-$schemas:
- - https://schema.org/version/latest/schema.rdf
- - http://edamontology.org/EDAM_1.18.owl
+#$schemas:
+# - https://schema.org/version/latest/schema.rdf
+# - http://edamontology.org/EDAM_1.18.owl