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removing unnecessary step, renaming cwl file
[arvados-tutorial.git] / cwl / bwamem-samtools-view-org.cwl
diff --git a/cwl/bwamem-samtools-view.cwl b/cwl/bwamem-samtools-view-org.cwl
similarity index 99%
rename from cwl/bwamem-samtools-view.cwl
rename to cwl/bwamem-samtools-view-org.cwl
index efc423e27db676afea44d840a826cff7e7584c51..689bf393906ccbb5e50353db21d4e6d53a236ca0 100644 (file)
--- a/cwl/bwamem-samtools-view.cwl
+++ b/cwl/bwamem-samtools-view-org.cwl
@@ -50,7 +50,7 @@ arguments:
   - -R
   - '@RG\tID:sample\tSM:sample\tLB:sample\tPL:ILLUMINA\tPU:sample1' 
   - -c
-  - 250
+  - '250'
   - $(inputs.fastq1)
   - $(inputs.fastq2)
   - shellQuote: false