Updating yml for 2 vcfs of known sites

[arvados-tutorial.git] / WGS-processing / yml / helper / scatter-gatk-wf-with-interval.yml

diff --git a/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml b/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml
index 20b5a3b916449050ff08d56180db0b316a2b6b39..bf0b9899ef04f89501df4b5c41f279b95f8150b2 100644 (file)
--- a/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml
+++ b/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml
@@ -16,7 +16,12 @@ sample: ERR1726424
 
 scattercount: '32'
 
-knownsites:
+knownsites1:
+  class: File
+  format: edam:format_3016
+  location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.dbsnp138.vcf
+
+knownsites2:
   class: File
   format: edam:format_3016
   location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz