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Updating yml for 2 vcfs of known sites
[arvados-tutorial.git]
/
WGS-processing
/
yml
/
helper
/
bwamem-gatk-report-wf.yml
diff --git
a/WGS-processing/yml/helper/bwamem-gatk-report-wf.yml
b/WGS-processing/yml/helper/bwamem-gatk-report-wf.yml
index 8a92726272133c31fd75e54cf977830d127584aa..424189e6405ff43e828d93fc4537feadba925523 100644
(file)
--- a/
WGS-processing/yml/helper/bwamem-gatk-report-wf.yml
+++ b/
WGS-processing/yml/helper/bwamem-gatk-report-wf.yml
@@
-40,7
+40,12
@@
tailhtml:
scattercount: '32'
scattercount: '32'
-knownsites:
+knownsites1:
+ class: File
+ format: edam:format_3016
+ location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.dbsnp138.vcf
+
+knownsites2:
class: File
format: edam:format_3016
location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz
class: File
format: edam:format_3016
location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz