X-Git-Url: https://git.arvados.org/arvados-dev.git/blobdiff_plain/5b7e2250d5802b20b73242ae4d0641b32f72cce7..14ef215b72d2d56986ad29f1358cf27f7be75294:/jenkins/run-tests.sh

diff --git a/jenkins/run-tests.sh b/jenkins/run-tests.sh
index 6700712..89e75a8 100755
--- a/jenkins/run-tests.sh
+++ b/jenkins/run-tests.sh
@@ -1,5 +1,7 @@
 #!/bin/bash
 
+. `dirname "$(readlink -f "$0")"`/libcloud-pin
+
 read -rd "\000" helpmessage <<EOF
 $(basename $0): Install and test Arvados components.
 
@@ -12,12 +14,15 @@ Options:
 
 --skip FOO     Do not test the FOO component.
 --only FOO     Do not test anything except the FOO component.
+--temp DIR     Install components and dependencies under DIR instead of
+               making a new temporary directory. Implies --leave-temp.
 --leave-temp   Do not remove GOPATH, virtualenv, and other temp dirs at exit.
-               Instead, show which directories were used this time so they
-               can be reused in subsequent invocations.
+               Instead, show the path to give as --temp to reuse them in
+               subsequent invocations.
 --skip-install Do not run any install steps. Just run tests.
                You should provide GOPATH, GEMHOME, and VENVDIR options
                from a previous invocation if you use this option.
+--only-install Run specific install step
 WORKSPACE=path Arvados source tree to test.
 CONFIGSRC=path Dir with api server config files to copy into source tree.
                (If none given, leave config files alone in source tree.)
@@ -27,6 +32,9 @@ sdk/python_test="--test-suite test.test_keep_locator"
                Restrict Python SDK tests to the given class
 apps/workbench_test="TEST=test/integration/pipeline_instances_test.rb"
                Restrict Workbench tests to the given file
+services/arv-git-httpd_test="-check.vv"
+               Show all log messages, even when tests pass (also works
+               with services/keepstore_test etc.)
 ARVADOS_DEBUG=1
                Print more debug messages
 envvar=value   Set \$envvar to value. Primarily useful for WORKSPACE,
@@ -51,18 +59,26 @@ apps/workbench_benchmark
 apps/workbench_profile
 doc
 services/api
+services/arv-git-httpd
 services/crunchstat
+services/dockercleaner
 services/fuse
+services/keep-web
 services/keepproxy
 services/keepstore
+services/login-sync
 services/nodemanager
-services/arv-git-httpd
 sdk/cli
+sdk/pam
 sdk/python
 sdk/ruby
 sdk/go/arvadosclient
 sdk/go/keepclient
+sdk/go/manifest
+sdk/go/blockdigest
 sdk/go/streamer
+sdk/go/crunchrunner
+tools/keep-rsync
 
 EOF
 
@@ -75,37 +91,31 @@ unset $(env | cut -d= -f1 | grep \^ARVADOS_)
 GITDIR=
 GOPATH=
 VENVDIR=
+VENV3DIR=
 PYTHONPATH=
 GEMHOME=
+PERLINSTALLBASE=
 
 COLUMNS=80
 
-leave_temp=
 skip_install=
+temp=
+temp_preserve=
 
-declare -A leave_temp
 clear_temp() {
-    leaving=""
-    for var in VENVDIR GOPATH GITDIR GEMHOME
-    do
-        if [[ -z "${leave_temp[$var]}" ]]
-        then
-            if [[ -n "${!var}" ]]
-            then
-                rm -rf "${!var}"
-            fi
-        else
-            leaving+=" $var=\"${!var}\""
-        fi
-    done
-    if [[ -n "$leaving" ]]; then
-        echo "Leaving behind temp dirs: $leaving"
+    if [[ -z "$temp" ]]; then
+        # we didn't even get as far as making a temp dir
+        :
+    elif [[ -z "$temp_preserve" ]]; then
+        rm -rf "$temp"
+    else
+        echo "Leaving behind temp dirs in $temp"
     fi
 }
 
 fatal() {
     clear_temp
-    echo >&2 "Fatal: $* in ${FUNCNAME[1]} at ${BASH_SOURCE[1]} line ${BASH_LINENO[0]}"
+    echo >&2 "Fatal: $* (encountered in ${FUNCNAME[1]} at ${BASH_SOURCE[1]} line ${BASH_LINENO[0]})"
     exit 1
 }
 
@@ -129,8 +139,9 @@ report_outcomes() {
 
 exit_cleanly() {
     trap - INT
+    create-plot-data-from-log.sh $BUILD_NUMBER "$WORKSPACE/apps/workbench/log/test.log" "$WORKSPACE/apps/workbench/log/"
     rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
-    stop_api
+    stop_services
     rotate_logfile "$WORKSPACE/services/api/log/" "test.log"
     report_outcomes
     clear_temp
@@ -138,47 +149,42 @@ exit_cleanly() {
 }
 
 sanity_checks() {
-  # Make sure WORKSPACE is set
-  if ! [[ -n "$WORKSPACE" ]]; then
-    echo >&2 "$helpmessage"
-    echo >&2
-    echo >&2 "Error: WORKSPACE environment variable not set"
-    echo >&2
-    exit 1
-  fi
-
-  # Make sure virtualenv is installed
-  `virtualenv --help >/dev/null 2>&1`
-
-  if [[ "$?" != "0" ]]; then
-    echo >&2
-    echo >&2 "Error: virtualenv could not be found"
-    echo >&2
-    exit 1
-  fi
-
-  # Make sure go is installed
-  `go env >/dev/null 2>&1`
-
-  if [[ "$?" != "0" ]]; then
-    echo >&2
-    echo >&2 "Error: go could not be found"
-    echo >&2
-    exit 1
-  fi
-
-  # Make sure gcc is installed
-  `gcc --help >/dev/null 2>&1`
-
-  if [[ "$?" != "0" ]]; then
-    echo >&2
-    echo >&2 "Error: gcc could not be found"
-    echo >&2
-    exit 1
-  fi
+    ( [[ -n "$WORKSPACE" ]] && [[ -d "$WORKSPACE/services" ]] ) \
+        || fatal "WORKSPACE environment variable not set to a source directory (see: $0 --help)"
+    echo Checking dependencies:
+    echo -n 'virtualenv: '
+    virtualenv --version \
+        || fatal "No virtualenv. Try: apt-get install virtualenv (on ubuntu: python-virtualenv)"
+    echo -n 'go: '
+    go version \
+        || fatal "No go binary. See http://golang.org/doc/install"
+    echo -n 'gcc: '
+    gcc --version | egrep ^gcc \
+        || fatal "No gcc. Try: apt-get install build-essential"
+    echo -n 'fuse.h: '
+    find /usr/include -wholename '*fuse/fuse.h' \
+        || fatal "No fuse/fuse.h. Try: apt-get install libfuse-dev"
+    echo -n 'pyconfig.h: '
+    find /usr/include -name pyconfig.h | egrep --max-count=1 . \
+        || fatal "No pyconfig.h. Try: apt-get install python-dev"
+    echo -n 'nginx: '
+    PATH="$PATH:/sbin:/usr/sbin:/usr/local/sbin" nginx -v \
+        || fatal "No nginx. Try: apt-get install nginx"
+    echo -n 'perl: '
+    perl -v | grep version \
+        || fatal "No perl. Try: apt-get install perl"
+    for mod in ExtUtils::MakeMaker JSON LWP Net::SSL; do
+        echo -n "perl $mod: "
+        perl -e "use $mod; print \"\$$mod::VERSION\\n\"" \
+            || fatal "No $mod. Try: apt-get install perl-modules libcrypt-ssleay-perl libjson-perl libwww-perl"
+    done
+    echo -n 'gitolite: '
+    which gitolite \
+        || fatal "No gitolite. Try: apt-get install gitolite3"
 }
 
 rotate_logfile() {
+  # i.e.  rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
   # $BUILD_NUMBER is set by Jenkins if this script is being called as part of a Jenkins run
   if [[ -f "$1/$2" ]]; then
     THEDATE=`date +%Y%m%d%H%M%S`
@@ -211,10 +217,16 @@ do
         --skip-install)
             skip_install=1
             ;;
+        --only-install)
+            skip_install=1
+            only_install="$1"; shift
+            ;;
+        --temp)
+            temp="$1"; shift
+            temp_preserve=1
+            ;;
         --leave-temp)
-            leave_temp[VENVDIR]=1
-            leave_temp[GOPATH]=1
-            leave_temp[GEMHOME]=1
+            temp_preserve=1
             ;;
         --retry)
             retry=1
@@ -243,7 +255,25 @@ start_api() {
         && (env | egrep ^ARVADOS)
 }
 
-stop_api() {
+start_nginx_proxy_services() {
+    echo 'Starting keepproxy, keep-web, arv-git-httpd, and nginx ssl proxy...'
+    cd "$WORKSPACE" \
+        && python sdk/python/tests/run_test_server.py start_keep_proxy \
+        && python sdk/python/tests/run_test_server.py start_keep-web \
+        && python sdk/python/tests/run_test_server.py start_arv-git-httpd \
+        && python sdk/python/tests/run_test_server.py start_nginx \
+        && export ARVADOS_TEST_PROXY_SERVICES=1
+}
+
+stop_services() {
+    if [[ -n "$ARVADOS_TEST_PROXY_SERVICES" ]]; then
+        unset ARVADOS_TEST_PROXY_SERVICES
+        cd "$WORKSPACE" \
+            && python sdk/python/tests/run_test_server.py stop_nginx \
+            && python sdk/python/tests/run_test_server.py stop_arv-git-httpd \
+            && python sdk/python/tests/run_test_server.py stop_keep-web \
+            && python sdk/python/tests/run_test_server.py stop_keep_proxy
+    fi
     if [[ -n "$ARVADOS_TEST_API_HOST" ]]; then
         unset ARVADOS_TEST_API_HOST
         cd "$WORKSPACE" \
@@ -270,13 +300,18 @@ fi
 cd "$WORKSPACE"
 find -name '*.pyc' -delete
 
+if [[ -z "$temp" ]]; then
+    temp="$(mktemp -d)"
+fi
+
 # Set up temporary install dirs (unless existing dirs were supplied)
-for tmpdir in VENVDIR GOPATH GEMHOME
+for tmpdir in VENVDIR VENV3DIR GOPATH GEMHOME PERLINSTALLBASE
 do
-    if [[ -n "${!tmpdir}" ]]; then
-        leave_temp[$tmpdir]=1
-    else
-        eval $tmpdir=$(mktemp -d)
+    if [[ -z "${!tmpdir}" ]]; then
+        eval "$tmpdir"="$temp/$tmpdir"
+    fi
+    if ! [[ -d "${!tmpdir}" ]]; then
+        mkdir "${!tmpdir}" || fatal "can't create ${!tmpdir} (does $temp exist?)"
     fi
 done
 
@@ -346,16 +381,68 @@ with_test_gemset() {
     if [[ "$using_rvm" == true ]]; then
         "$@"
     else
-        GEM_HOME="$tmpdir_gem_home" "$@"
+        GEM_HOME="$tmpdir_gem_home" GEM_PATH="$tmpdir_gem_home" "$@"
     fi
 }
 
+gem_uninstall_if_exists() {
+    if gem list "$1\$" | egrep '^\w'; then
+        gem uninstall --force --all --executables "$1"
+    fi
+}
+
+setup_virtualenv() {
+    local venvdest=$1; shift
+    if ! [[ -e "$venvdest/bin/activate" ]] || ! [[ -e "$venvdest/bin/pip" ]]; then
+        virtualenv --setuptools "$@" "$venvdest" || fatal "virtualenv $venvdest failed"
+    fi
+    "$venvdest/bin/pip" install 'setuptools>=18' 'pip>=7'
+    # ubuntu1404 can't seem to install mock via tests_require, but it can do this.
+    "$venvdest/bin/pip" install 'mock>=1.0' 'pbr<1.7.0'
+}
+
+export PERLINSTALLBASE
+export PERLLIB="$PERLINSTALLBASE/lib/perl5:${PERLLIB:+$PERLLIB}"
+
 export GOPATH
 mkdir -p "$GOPATH/src/git.curoverse.com"
 ln -sfn "$WORKSPACE" "$GOPATH/src/git.curoverse.com/arvados.git" \
     || fatal "symlink failed"
 
-virtualenv --setuptools "$VENVDIR" || fatal "virtualenv $VENVDIR failed"
+setup_virtualenv "$VENVDIR" --python python2.7
+. "$VENVDIR/bin/activate"
+
+# Needed for run_test_server.py which is used by certain (non-Python) tests.
+pip freeze 2>/dev/null | egrep ^PyYAML= \
+    || pip install PyYAML >/dev/null \
+    || fatal "pip install PyYAML failed"
+
+# Preinstall forked version of libcloud, because nodemanager "pip install"
+# won't pick it up by default.
+pip freeze 2>/dev/null | egrep ^apache-libcloud==$LIBCLOUD_PIN \
+    || pip install --pre --ignore-installed https://github.com/curoverse/libcloud/archive/apache-libcloud-$LIBCLOUD_PIN.zip >/dev/null \
+    || fatal "pip install apache-libcloud failed"
+
+# Deactivate Python 2 virtualenv
+deactivate
+
+# If Python 3 is available, set up its virtualenv in $VENV3DIR.
+# Otherwise, skip dependent tests.
+PYTHON3=$(which python3)
+if [ "0" = "$?" ]; then
+    setup_virtualenv "$VENV3DIR" --python python3
+else
+    PYTHON3=
+    skip[services/dockercleaner]=1
+    cat >&2 <<EOF
+
+Warning: python3 could not be found
+services/dockercleaner install and tests will be skipped
+
+EOF
+fi
+
+# Reactivate Python 2 virtualenv
 . "$VENVDIR/bin/activate"
 
 # Note: this must be the last time we change PATH, otherwise rvm will
@@ -369,10 +456,6 @@ then
     gem install --user-install bundler || fatal 'Could not install bundler'
 fi
 
-# Needed for run_test_server.py which is used by certain (non-Python) tests.
-echo "pip install -q PyYAML"
-pip install -q PyYAML || fatal "pip install PyYAML failed"
-
 checkexit() {
     if [[ "$1" != "0" ]]; then
         title "!!!!!! $2 FAILED !!!!!!"
@@ -402,24 +485,48 @@ do_test() {
 }
 
 do_test_once() {
+    unset result
     if [[ -z "${skip[$1]}" ]] && ( [[ -z "$only" ]] || [[ "$only" == "$1" ]] )
     then
         title "Running $1 tests"
         timer_reset
         if [[ "$2" == "go" ]]
         then
-            go test ${testargs[$1]} "git.curoverse.com/arvados.git/$1"
+            covername="coverage-$(echo "$1" | sed -e 's/\//_/g')"
+            coverflags=("-covermode=count" "-coverprofile=$WORKSPACE/tmp/.$covername.tmp")
+            # We do "go get -t" here to catch compilation errors
+            # before trying "go test". Otherwise, coverage-reporting
+            # mode makes Go show the wrong line numbers when reporting
+            # compilation errors.
+            if [[ -n "${testargs[$1]}" ]]
+            then
+                # "go test -check.vv giturl" doesn't work, but this
+                # does:
+                cd "$WORKSPACE/$1" && \
+                    go get -t "git.curoverse.com/arvados.git/$1" && \
+                    go test ${coverflags[@]} ${testargs[$1]}
+            else
+                # The above form gets verbose even when testargs is
+                # empty, so use this form in such cases:
+                go get -t "git.curoverse.com/arvados.git/$1" && \
+                    go test ${coverflags[@]} "git.curoverse.com/arvados.git/$1"
+            fi
+            result="$?"
+            go tool cover -html="$WORKSPACE/tmp/.$covername.tmp" -o "$WORKSPACE/tmp/$covername.html"
+            rm "$WORKSPACE/tmp/.$covername.tmp"
         elif [[ "$2" == "pip" ]]
         then
-           cd "$WORKSPACE/$1" \
-                && python setup.py test ${testargs[$1]}
+            # $3 can name a path directory for us to use, including trailing
+            # slash; e.g., the bin/ subdirectory of a virtualenv.
+            cd "$WORKSPACE/$1" \
+                && "${3}python" setup.py test ${testargs[$1]}
         elif [[ "$2" != "" ]]
         then
             "test_$2"
         else
             "test_$1"
         fi
-        result="$?"
+        result=${result:-$?}
         checkexit $result "$1 tests"
         title "End of $1 tests (`timer`)"
         return $result
@@ -429,7 +536,7 @@ do_test_once() {
 }
 
 do_install() {
-    if [[ -z "$skip_install" ]]
+    if [[ -z "$skip_install" || (-n "$only_install" && "$only_install" == "$1") ]]
     then
         title "Running $1 install"
         timer_reset
@@ -438,9 +545,23 @@ do_install() {
             go get -t "git.curoverse.com/arvados.git/$1"
         elif [[ "$2" == "pip" ]]
         then
+            # $3 can name a path directory for us to use, including trailing
+            # slash; e.g., the bin/ subdirectory of a virtualenv.
+
+            # Need to change to a different directory after creating
+            # the source dist package to avoid a pip bug.
+            # see https://arvados.org/issues/5766 for details.
+
+            # Also need to install twice, because if it believes the package is
+            # already installed, pip it won't install it.  So the first "pip
+            # install" ensures that the dependencies are met, the second "pip
+            # install" ensures that we've actually installed the local package
+            # we just built.
             cd "$WORKSPACE/$1" \
-                && python setup.py sdist rotate --keep=1 --match .tar.gz \
-                && pip install -q --upgrade dist/*.tar.gz
+                && "${3}python" setup.py sdist rotate --keep=1 --match .tar.gz \
+                && cd "$WORKSPACE" \
+                && "${3}pip" install --quiet "$WORKSPACE/$1/dist"/*.tar.gz \
+                && "${3}pip" install --quiet --no-deps --ignore-installed "$WORKSPACE/$1/dist"/*.tar.gz
         elif [[ "$2" != "" ]]
         then
             "install_$2"
@@ -478,24 +599,38 @@ install_doc() {
 }
 do_install doc
 
-install_ruby_sdk() {
-    with_test_gemset gem uninstall --force --all --executables arvados \
-        && cd "$WORKSPACE/sdk/ruby" \
+install_gem() {
+    gemname=$1
+    srcpath=$2
+    with_test_gemset gem_uninstall_if_exists "$gemname" \
+        && cd "$WORKSPACE/$srcpath" \
         && bundle_install_trylocal \
-        && gem build arvados.gemspec \
-        && with_test_gemset gem install --no-ri --no-rdoc `ls -t arvados-*.gem|head -n1`
+        && gem build "$gemname.gemspec" \
+        && with_test_gemset gem install --no-ri --no-rdoc $(ls -t "$gemname"-*.gem|head -n1)
+}
+
+install_ruby_sdk() {
+    install_gem arvados sdk/ruby
 }
 do_install sdk/ruby ruby_sdk
 
+install_perl_sdk() {
+    cd "$WORKSPACE/sdk/perl" \
+        && perl Makefile.PL INSTALL_BASE="$PERLINSTALLBASE" \
+        && make install INSTALLDIRS=perl
+}
+do_install sdk/perl perl_sdk
+
 install_cli() {
-    with_test_gemset gem uninstall --force --all --executables arvados-cli \
-        && cd "$WORKSPACE/sdk/cli" \
-        && bundle_install_trylocal \
-        && gem build arvados-cli.gemspec \
-        && with_test_gemset gem install --no-ri --no-rdoc `ls -t arvados-cli-*.gem|head -n1`
+    install_gem arvados-cli sdk/cli
 }
 do_install sdk/cli cli
 
+install_login-sync() {
+    install_gem arvados-login-sync services/login-sync
+}
+do_install services/login-sync login-sync
+
 # Install the Python SDK early. Various other test suites (like
 # keepproxy) bring up run_test_server.py, which imports the arvados
 # module. We can't actually *test* the Python SDK yet though, because
@@ -503,6 +638,7 @@ do_install sdk/cli cli
 # keepproxy).
 declare -a pythonstuff
 pythonstuff=(
+    sdk/pam
     sdk/python
     services/fuse
     services/nodemanager
@@ -511,6 +647,9 @@ for p in "${pythonstuff[@]}"
 do
     do_install "$p" pip
 done
+if [ -n "$PYTHON3" ]; then
+    do_install services/dockercleaner pip "$VENV3DIR/bin/"
+fi
 
 install_apiserver() {
     cd "$WORKSPACE/services/api" \
@@ -551,8 +690,9 @@ install_apiserver() {
     # Clear out any lingering postgresql connections to the test
     # database, so that we can drop it. This assumes the current user
     # is a postgresql superuser.
-    test_database=$(python -c "import yaml; print yaml.load(file('config/database.yml'))['test']['database']")
-    psql "$test_database" -c "SELECT pg_terminate_backend (pg_stat_activity.procpid::int) FROM pg_stat_activity WHERE pg_stat_activity.datname = '$test_database';" 2>/dev/null
+    cd "$WORKSPACE/services/api" \
+        && test_database=$(python -c "import yaml; print yaml.load(file('config/database.yml'))['test']['database']") \
+        && psql "$test_database" -c "SELECT pg_terminate_backend (pg_stat_activity.procpid::int) FROM pg_stat_activity WHERE pg_stat_activity.datname = '$test_database';" 2>/dev/null
 
     cd "$WORKSPACE/services/api" \
         && RAILS_ENV=test bundle exec rake db:drop \
@@ -563,13 +703,22 @@ do_install services/api apiserver
 
 declare -a gostuff
 gostuff=(
+    sdk/go/arvadosclient
+    sdk/go/blockdigest
+    sdk/go/manifest
+    sdk/go/streamer
+    sdk/go/crunchrunner
     services/arv-git-httpd
     services/crunchstat
+    services/keep-web
     services/keepstore
-    services/keepproxy
-    sdk/go/arvadosclient
     sdk/go/keepclient
-    sdk/go/streamer
+    services/keepproxy
+    services/datamanager/summary
+    services/datamanager/collection
+    services/datamanager/keep
+    services/datamanager
+    tools/keep-rsync
     )
 for g in "${gostuff[@]}"
 do
@@ -590,12 +739,12 @@ test_doclinkchecker() {
         ARVADOS_API_HOST=qr1hi.arvadosapi.com
         # Make sure python-epydoc is installed or the next line won't
         # do much good!
-        PYTHONPATH=$WORKSPACE/sdk/python/ bundle exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
+        PYTHONPATH=$WORKSPACE/sdk/python/ bundle exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=https://workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
     )
 }
 do_test doc doclinkchecker
 
-stop_api
+stop_services
 
 test_apiserver() {
     cd "$WORKSPACE/services/api" \
@@ -625,10 +774,17 @@ test_cli() {
 }
 do_test sdk/cli cli
 
+test_login-sync() {
+    cd "$WORKSPACE/services/login-sync" \
+        && bundle exec rake test TESTOPTS=-v ${testargs[services/login-sync]}
+}
+do_test services/login-sync login-sync
+
 for p in "${pythonstuff[@]}"
 do
     do_test "$p" pip
 done
+do_test services/dockercleaner pip "$VENV3DIR/bin/"
 
 for g in "${gostuff[@]}"
 do
@@ -636,19 +792,22 @@ do
 done
 
 test_workbench() {
-    cd "$WORKSPACE/apps/workbench" \
+    start_nginx_proxy_services \
+        && cd "$WORKSPACE/apps/workbench" \
         && RAILS_ENV=test bundle exec rake test TESTOPTS=-v ${testargs[apps/workbench]}
 }
 do_test apps/workbench workbench
 
 test_workbench_benchmark() {
-    cd "$WORKSPACE/apps/workbench" \
+    start_nginx_proxy_services \
+        && cd "$WORKSPACE/apps/workbench" \
         && RAILS_ENV=test bundle exec rake test:benchmark ${testargs[apps/workbench_benchmark]}
 }
 do_test apps/workbench_benchmark workbench_benchmark
 
 test_workbench_profile() {
-    cd "$WORKSPACE/apps/workbench" \
+    start_nginx_proxy_services \
+        && cd "$WORKSPACE/apps/workbench" \
         && RAILS_ENV=test bundle exec rake test:profile ${testargs[apps/workbench_profile]}
 }
 do_test apps/workbench_profile workbench_profile